Program

16th Mon	17th Tue	18th Wed	19th Thu	20th Fri
Registration Symposium Reception	Hackathon	Hackathon Excursion Social Dinner	Hackathon	Hackathon G. Wrap-up

16 (Mon) - Symposium (DDBJ)

09:30 - 10:00	\| Registration
10:00 - 10:05	\| Opening remarks \| Kousaku Okubo
10:05 - 10:15	\| Introduction to BLAH2 \| Jin-Dong Kim
10:15 - 11:05	\| Biomedical semantic technologies: from the bench to the bedside Keynote \| Dietrich Rebholz-Schuhmann
11:05 - 11:15	\| Deriving Linked Annotations from Corpora \| Mariana Neves
11:15 - 11:30	\| Coffee Break
11:30 - 12:20	\| Natural Language Processing and Semantic Annotation of Biomedical Scientific Literature \| for Knowledge Network Discovery Keynote \| Cathy Wu
12:20 - 12:30	\| The SPECIES-800 corpus \| Evangelos Pafilis and Lars Juhl Jensen
12:30 - 13:30	\| Lunch
13:30 - 14:20	\| From Text to Knowledge Base and back: issues and challenges in Life Sciences Keynote \| Claire Nédellec
14:20 - 14:30	\| Lannbridge: transparent interoperability for Linked Annotations \| Sampo Pyysalo
14:30 - 14:40	\| Real-time tagging of biomedical entities \| Evangelos Pafilis and Lars Juhl Jensen
14:40 - 14:50	\| Making tagtog interoperate with PubAnnotation \| Juan Miguel Cejuela and Jorge Campos
14:50 - 15:00	\| BioTate, an annotation framework for biomedical information \| Alexander Garcia, Olga Giraldo and Federico López Gómez
15:00 - 15:15	\| Coffee Break
15:15 - 16:05	\| Validating the wisdom of the crowd for pharmacovigilance: linking adverse reactions \| reported in Social Media to literature Keynote \| Graciela Gonzalez
16:05 - 16:15	\| Unifying knowledge resources for named entity recognition and normalization \| Robert Leaman and Zhiyong Lu
16:15 - 16:25	\| relna: corpus of Relations of Transcription Factors to Genes or Proteins \| Ashish Baghudana and Juan Miguel Cejuela
16:25 - 16:35	\| A corpus of psychological diseases and their potential causes \| Fabio Rinaldi
16:35 - 16:40	\| Closing
16:40 - 17:00	\| Free (Organizers to clean the venue)
17:00 - 18:30	\| Travel to Hotel Harvest (charter bus)
19:00 - 21:00	\| Reception, Introduction to BLAH

17 (Tue) - Hackathon

09:00 - 10:00	\| Talk: Context-aware Mining of Biomedical Literature, \| Clinical Narrative and Healthcare Social Media \| Goran Nenadic
10:00 - 12:00	\| Introductions, Planning, Grouping
12:00 - 13:00	\| Lunch
13:00 - 16:30	\| Hacking
16:30 - 17:30	\| Wrap-up
17:30 - 19:00	\| Dinner

18 (Wed) - Hackathon

09:00 - 10:00	\| Talk: From GenBank to literature and back: challenges and approaches \| linking geographic references in literature for biomedicine. \| Graciela Gonzalez
10:00 - 12:00	\| Hacking
12:00 - 13:00	\| Lunch
13:00 - 15:00	\| Hacking
15:30 - 20:00	\| Excursion and Social Dinner \| Shogetu Temple & Ito Park

19 (Thu) - Hackathon

09:00 - 10:00	\| Talk: Data and text mining of Danish electronic health records \| Lars Juhl Jensen
10:00 - 12:00	\| Hacking
12:00 - 13:00	\| Lunch
13:00 - 16:30	\| Hacking
16:30 - 17:30	\| Wrap-up
17:30 - 19:00	\| Dinner